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病毒基因组
基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV19605890 hCoV-19/dog/SouthKorea/03-G-01/2021 EPI_ISL_15788906 RNA virus Severe acute respiratory syndrome coronavirus 2 South Korea 2021-02-19 canis lupus 29876 2022-11-16 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Animal Hygiene Laboratory Office, Gyeonggi-do Yeun-Kyung Shin, Oh-Kyu Kwon, Jinhwa Heo, Jinju Nah, Hae-Eun Kang, Yunhee kang, In Jun Song, Ho-Kyung Sung Emerging Infectious Disease lab, Foreign Animal Disease Division, Animal and Plant Qurantine Agency, Repubic of Korea 29876 100.00
OEAV19605891 hCoV-19/dog/SouthKorea/06-J-01/2021 EPI_ISL_15775590 RNA virus Severe acute respiratory syndrome coronavirus 2 South Korea 2021-05-28 canis lupus 29633 2022-11-15 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Animal Hygiene Laboratory Office, Jeollabuk-do Yeun-Kyung Shin, Oh-Kyu Kwon, Jinhwa Heo, Jinju Nah, Hae-Eun Kang, Yunhee kang, In Jun Song, Ho-Kyung Sung Emerging Infectious Disease lab, Foreign Animal Disease Division, Animal and Plant Qurantine Agency, Repubic of Korea 29633 100.00
OEAV19605892 hCoV-19/dog/SouthKorea/07-G-N-01/2021 EPI_ISL_15775591 RNA virus Severe acute respiratory syndrome coronavirus 2 South Korea 2021-08-10 canis lupus 29860 2022-11-15 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Northern Animal Hygiene Laboratory Office, Gyeonggi-do Yeun-Kyung Shin, Oh-Kyu Kwon, Jinhwa Heo, Jinju Nah, Hae-Eun Kang, Yunhee kang, In Jun Song, Ho-Kyung Sung Emerging Infectious Disease lab, Foreign Animal Disease Division, Animal and Plant Qurantine Agency, Repubic of Korea 29618 99.19
OEAV19605895 hCoV-19/dog/SouthKorea/S-038/2021 EPI_ISL_15775594 RNA virus Severe acute respiratory syndrome coronavirus 2 South Korea 2021-06-06 canis lupus 29853 2022-11-15 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Animal Health Center, Research Institute of Public Health and Environment, Seoul Yeun-Kyung Shin, Oh-Kyu Kwon, Jinhwa Heo, Jinju Nah, Hae-Eun Kang, Yunhee kang, In Jun Song, Ho-Kyung Sung Emerging Infectious Disease lab, Foreign Animal Disease Division, Animal and Plant Qurantine Agency, Repubic of Korea 29845 99.97
OEAV19605896 hCoV-19/dog/SouthKorea/S-065/2021 EPI_ISL_15793142 RNA virus Severe acute respiratory syndrome coronavirus 2 South Korea 2021-07-27 Canis lupus 29804 2022-11-16 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Animal Health Center, Research Institute of Public Health and Environment, Seoul Yeun-Kyung Shin, Oh-Kyu Kwon, Jinhwa Heo, Jinju Nah, Hae-Eun Kang, Yunhee kang, In Jun Song, Ho-Kyung Sung Emerging Infectious Disease lab, Foreign Animal Disease Division, Animal and Plant Qurantine Agency, Repubic of Korea 29804 100.00
OEAV19605897 hCoV-19/dog/SouthKorea/S-079/2021 EPI_ISL_15775595 RNA virus Severe acute respiratory syndrome coronavirus 2 South Korea 2021-08-10 canis lupus 29860 2022-11-15 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Animal Health Center, Research Institute of Public Health and Environment, Seoul Yeun-Kyung Shin, Oh-Kyu Kwon, Jinhwa Heo, Jinju Nah, Hae-Eun Kang, Yunhee kang, In Jun Song, Ho-Kyung Sung Emerging Infectious Disease lab, Foreign Animal Disease Division, Animal and Plant Qurantine Agency, Repubic of Korea 29833 99.91
OEAV19659801 hCoV-19/dog/Thailand/CU28424/2022 EPI_ISL_15833374 RNA virus Severe acute respiratory syndrome coronavirus 2 Thailand 2022-03-22 Canis lupus familiaris 29759 2022-11-21 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Center of Excellence of Emerging and Re-emerging Infectious Diseases in Animals Faculty of Veterinary Science, Chulalongkorn University Supassama Chaiyawong, Kamonpan Charoenkul, Waleemas Jairak, Kitikhun Udom, Ekkapat Chamsai, Navapon Techakriengkrai, Kamol Suwannakarn, Alongkorn Amonsin Center of Excellence of Emerging and Re-emerging Infectious Diseases in Animals Faculty of Veterinary Science, Chulalongkorn University 27604 92.76
OEAV21044769 hCoV-19/dog/USA/CA-NVSL-23-004715-001/2023 EPI_ISL_17347804 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2023-02-02 Canis lupus familiaris 29333 2023-03-29 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID IDEXX Reference Laboratories Thanh Chinh, Emily Love, Kerrie Franzen, Mary Lea Killian, Kristina Lantz, Tod Stuber, Jessica Hicks, Cameron Norris Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 28232 96.25
OEAV21044770 hCoV-19/dog/USA/CA-NVSL-23-007784-001/2023 EPI_ISL_17347805 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2023-03-03 Canis lupus familiaris 29736 2023-03-29 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Antech Diagnostics Thanh Chinh, Emily Love, Kerrie Franzen, Mary Lea Killian, Kristina Lantz, Tod Stuber, Jessica Hicks, Cameron Norris Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29339 98.66
OEAV21044771 hCoV-19/dog/USA/NJ-NVSL-23-002349-001/2023 EPI_ISL_17347802 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2023-01-13 Canis lupus familiaris 29625 2023-03-29 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID IDEXX Reference Laboratories Thanh Chinh, Emily Love, Kerrie Franzen, Mary Lea Killian, Kristina Lantz, Tod Stuber, Jessica Hicks, Cameron Norris Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29260 98.77
OEAV21044772 hCoV-19/dog/USA/TX-NVSL-23-000551-002/2022 EPI_ISL_17347801 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-12-22 Canis lupus familiaris 29353 2023-03-29 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID IDEXX Reference Laboratories Thanh Chinh, Emily Love, Kerrie Franzen, Mary Lea Killian, Kristina Lantz, Tod Stuber, Jessica Hicks, Cameron Norris Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 28567 97.32
OEAV21245560 hCoV-19/dog/Colombia/SAN-CIMBIUR-CS110/2021 EPI_ISL_17620242 RNA virus Severe acute respiratory syndrome coronavirus 2 Colombia 2021-06-05 Canis lupus familiaris 29581 2023-05-05 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Universidad de Pamplona Claudia Magaly Sandoval- Ramírez, Nathalia Ballesteros, Juan Carlos Pinilla, Carolina Hernández, Marina Muñoz, Juan David Ramírez Centro de Investigaciones en Microbiología y Biotecnología-UR (CIMBIUR), Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia 19645 66.41
OEAV21245561 hCoV-19/dog/Colombia/SAN-CIMBIUR-CS67/2021 EPI_ISL_17620240 RNA virus Severe acute respiratory syndrome coronavirus 2 Colombia 2021-09-09 Canis lupus familiaris 29568 2023-05-05 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Universidad de Pamplona Claudia Magaly Sandoval- Ramírez, Nathalia Ballesteros, Juan Carlos Pinilla, Carolina Hernández, Marina Muñoz, Juan David Ramírez Centro de Investigaciones en Microbiología y Biotecnología-UR (CIMBIUR), Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia 24553 83.04
OEAV21245562 hCoV-19/dog/Colombia/SAN-CIMBIUR-CS76/2021 EPI_ISL_17620241 RNA virus Severe acute respiratory syndrome coronavirus 2 Colombia 2021-09-09 Canis lupus familiaris 29573 2023-05-05 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Universidad de Pamplona Claudia Magaly Sandoval- Ramírez, Nathalia Ballesteros, Juan Carlos Pinilla, Carolina Hernández, Marina Muñoz, Juan David Ramírez Centro de Investigaciones en Microbiología y Biotecnología-UR (CIMBIUR), Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia 27874 94.25
OEAV21432127 hCoV-19/dog/USA/CO-CSU-353/2022 EPI_ISL_17821928 RNA virus Severe acute respiratory syndrome coronavirus 2 USA 2022-06-29 Canis lupus familiaris 29658 2023-06-21 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Mayo Lab, Colorado State University, Department of Microbiology, Immunology, and Pathology McKenzie N. Sparrer, Natasha F. Hodges, Izabela Ragan, Tyler Yamashita, Kirsten J. Reed, Tyler J. Sherman, Treana Mayer, Danielle R. Adney, Molly Carpenter, Tracy L. Webb, Christie Mayo Mayo Lab, Colorado State University, Department of Microbiology, Immunology, and Pathology 29615 99.86
OEAV21569854 hCoV-19/dog/USA/TX-CDC-5035715-001/2022 EPI_ISL_18065574 RNA virus Severe acute respiratory syndrome coronavirus 2 USA 2022-02-11 Canis lupus familiaris 29318 2023-08-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Texas A & M University Ying Tao, Francisco Ferreira, Yan Li, Jing Zhang, Haibin Wang, Lakshmi Malapati, Peter Cook, Ria Ghia, Kristine Lacek, Adam Retchless, Sarah Hamer, Suxiang Tong Centers for Disease Control and Prevention, Coronavirus and Other Respiratory Viruses Division, CRVLB 28617 97.61
OEAV21569855 hCoV-19/dog/USA/TX-CDC-5035716-001/2022 EPI_ISL_18065573 RNA virus Severe acute respiratory syndrome coronavirus 2 USA 2022-04-29 Canis lupus familiaris 29306 2023-08-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Texas A & M University Ying Tao, Francisco Ferreira, Yan Li, Jing Zhang, Haibin Wang, Lakshmi Malapati, Peter Cook, Ria Ghia, Kristine Lacek, Adam Retchless, Sarah Hamer, Suxiang Tong Centers for Disease Control and Prevention, Coronavirus and Other Respiratory Viruses Division, CRVLB 29306 100.00
OEAV22323557 hCoV-19/dog/England/M11-01/2021 EPI_ISL_18943725 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2021-10-29 Canis lupus familiaris 29876 2024-02-21 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Animal and Plant Health Agency (APHA) Virology Department Amanda Seekings, Rebecca Shipley, Alexander Byrne, Shweta Shukla, Megan Golding, Joan Amaya-Cuesta, Hooman Goharriz, Ana Gómez Vitores, Fabian Lean, Joe James, Alejandro Núñez, Alistair Breed, Andrew Frost, Jörg Balzer, Ian Brown, Sharon Brookes, Lorraine McElhinney. Animal and Plant Health Agency (APHA) Virology Department 29830 99.85
OEAV22323558 hCoV-19/dog/England/M14-11/2021 EPI_ISL_18943729 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2021-12-13 Canis lupus familiaris 29848 2024-02-21 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Animal and Plant Health Agency (APHA) Virology Department Amanda Seekings, Rebecca Shipley, Alexander Byrne, Shweta Shukla, Megan Golding, Joan Amaya-Cuesta, Hooman Goharriz, Ana Gómez Vitores, Fabian Lean, Joe James, Alejandro Núñez, Alistair Breed, Andrew Frost, Jörg Balzer, Ian Brown, Sharon Brookes, Lorraine McElhinney. Animal and Plant Health Agency (APHA) Virology Department 29398 98.49
OEAV22323559 hCoV-19/dog/Jersey/M8-02/2021 EPI_ISL_18943724 RNA virus Severe acute respiratory syndrome coronavirus 2 Jersey 2021-07-09 Canis lupus familiaris 29850 2024-02-21 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Animal and Plant Health Agency (APHA) Virology Department Amanda Seekings, Rebecca Shipley, Alexander Byrne, Shweta Shukla, Megan Golding, Joan Amaya-Cuesta, Hooman Goharriz, Ana Gómez Vitores, Fabian Lean, Joe James, Alejandro Núñez, Alistair Breed, Andrew Frost, Jörg Balzer, Ian Brown, Sharon Brookes, Lorraine McElhinney. Animal and Plant Health Agency (APHA) Virology Department 29707 99.52
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